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2004

  • Stamatakis A., T. Ludwig, and H. Meier. 2004. Parallel Inference of a 10.000-taxon Phylogeny with Maximum Likelihood. Lecture Notes in Computer Science, 3149:997-1004.
  • Stamatakis A., T. Ludwig, and H. Meier. 2004. A Fast Program for Phylogenetic Tree Inference with Maximum Likelihood, pp 273-284 In: Siegfried Wagner, Werner Hanke, Arndt Bode, Franz Durst (eds.), High Performance Computing in Science and Engineering, Munich 2004, Springer Verlag, Berlin.
  • Stamatakis A., T. Ludwig, and H. Meier. 2004. Parallel Inference of a 10.000-taxon Phylogeny with Maximum Likelihood. Proceedings of Euro-Par 2004, Pisa, Italy, September 2004.
  • Stamatakis A. P., T. Ludwig and H. Meier. 2004. New Fast and Accurate Heuristics for Inference of Large Phylogenetic Trees. Procceedings of 18th ACM/IEEE International Parallel and Distributed Processing Symposium (IPDPS2004), High Performance Computational Biology Workshop, Santa Fe, New Mexico, April 2004.
  • Stamatakis A. P., T. Ludwig, and H. Meier. 2004. A Fast Program for Maximum Likelihood-based Inferrence of Large Phylogenetic Trees. Proceedings of 19th ACM Symposium on Applied Computing (SAC 2004), Nicosia, Cyprus, March 2004, 197-201.
  • Meier, H., A. Krause, M. Kräutner and A. Bode. 2004. Development and implementation of a parallel algorithm for the fast design of oligonucleotide probe sets for diagnostic DNA microarrays. Concurrency and Computation: Practice and Experience, 16:873-893.
  • Stamatakis, A. P., T. Ludwig and H. Meier. 2004. The AxML Program Family for Maximum Likelihood-based Phylogenetic Tree Inferrence. Concurrency and Computation: Practice and Experience, 16:975-988.
  • Ludwig, W., O. Strunk, Ralf Westram, Lothar Richter, Harald Meier, Yadhukumar, Arno Buchner, Tina Lai, Susanne Steppi, Gangolf Jobb, Wolfram Förster, Igor Brettske, Stefan Gerber, Anton W. Ginhart, Oliver Gross, Silke Grumann, Stefan Hermann, Ralf Jost, Andreas König, Thomas Liss, Ralph Lüßmann, Michael May, Björn Nonhoff, Boris Reichel, Robert Strehlow, Alexandros P. Stamatakis, Norbert Stuckmann, Alex-ander Vilbig, Michael Lenke, Thomas Ludwig, Arndt Bode and Karl-Heinz Schleifer. 2004. ARB: a software environment for sequence data. Nucleic Acids Research, 32 (4):1363-1371

2003

  • Meier H. und A. Bode. 2003. Dem Geheimnis des Lebens auf der Spur. In Zukunft im Brennpunkt. Hrsg.: Arbeitsgemeinschaft der Bayerischen Forschungsverbünde, Band 2, pp. 33-38.
  • Stamatakis, A. P., M. Lindermeier, M. Ott, T. Ludwig, and H. Meier. DAxML: A Program for Distributed Computation of Phylogenetic Trees Based on Load Managed CORBA. In Proceedings of 7th International Conference on Parallel Computing Technologies (PaCT2003), Volume 2763 of Lecture Notes in Computer Science, 538-548, Springer Verlag, September 2003.
  • Stamatakis, A. P., T. Ludwig, and H. Meier. 2003. Neues vom Projekt ParBaum - Parallele und verteilte Systeme und Algorithmen zur Berechnung großer phylogenetischer Bäume mit Maximum-Likelihood (Parallel and Distributed Systems and Algorithms for the Inference of big Phylogenetic Trees with Maximum Likelihood). In KONWIHR Quartl, 34.Ausgabe 1/2003 p.4-7, May 2003.
  • Krause, A., Kräutner, M., and H. Meier. 2003. Accurate Method for Fast Design of Diagnostic Oligonucleotide Probe Sets for DNA Microarrays. In: Proceedings of the 17th International Parallel & Distributed Processing Symposium (IPDPS2003), High Performance Computational Biology workshop, IEEE Computer Society, Nice, France.

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Harald Meier
Last modified: Tue Jan 23 17:31:39 CEST 2008